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[1]
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Florian Mittag, Michael Römer, and Andreas Zell.
Influence of Feature Encoding and Choice of Classifier on Disease
Risk Prediction in Genome-Wide Association Studies.
PLoS ONE, 10(8):e0135832, August 2015.
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[2]
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Nicolas Rodriguez, Alex Thomas, Leandro Watanabe, Ibrahim Y. Vazirabad, Victor
Kofia, Harold F. Gómez, Florian Mittag, Jakob Matthes, Jan D. Rudolph,
Finja Wrzodek, Eugen Netz, Alexander Diamantikos, Johannes Eichner, Roland
Keller, Clemens Wrzodek, Sebastian Fröhlich, Nathan E. Lewis, Chris J.
Myers, Nicolas Le Novère, Bernhard Ø. Palsson, Michael Hucka, and
Andreas Dräger.
JSBML 1.0: providing a smorgasbord of options to encode systems
biology models.
Bioinformatics, June 2015.
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arXiv |
details |
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[3]
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Finja Büchel, Nicolas Rodriguez, Neil Swainston, Clemens Wrzodek, Tobias
Czauderna, Roland Keller, Florian Mittag, Michael Schubert, Mihai Glont,
Martin Golebiewski, Martijn van Iersel, Sarah M. Keating, Matthias Rall,
Michael Wybrow, Henning Hermjakob, Michael Hucka, Douglas B Kell, Wolfgang
Müller, Pedro Mendes, Andreas Zell, Claudine Chaouiya, Julio
Saez-Rodriguez, Falk Schreiber, Camille Laibe, Andreas Dräger, and Nicolas
Le Novère.
Path2Models: large-scale generation of computational models from
biochemical pathway maps.
BMC Systems Biology, 7(1):116, November 2013.
[ DOI |
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[4]
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Finja Büchel, Florian Mittag, Clemens Wrzodek, Andreas Zell, Thomas Gasser,
and Manu Sharma.
Integrative pathway-based approach for genome-wide association
studies: identification of new pathways for rheumatoid arthritis and type 1
diabetes.
PLoS ONE, 8(10), September 2013.
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link ]
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[5]
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Peter Holmans, Valentina Moskvina, Lesley Jones, Manu Sharma, The
International Parkinson's Disease Genomics Consortium (IPDGC), Alexey
Vedernikov, Finja Büchel, Mohamad Sadd, Jose M. Bras, Francesco Bettella,
Nayia Nicolaou, Javier Simón-Sánchez, Florian Mittag, J. Raphael
Gibbs, Claudia Schulte, Alexandra Durr, Rita Guerreiro, Dena Hernandez,
Alexis Brice, Hreinn Stefánsson, Kari Majamaa, Thomas Gasser, Peter
Heutink, Nicholas W. Wood, Maria Martinez, Andrew B. Singleton, Michael A.
Nalls, John Hardy, Huw R. Morris, and Nigel M. Williams.
A pathway-based analysis provides additional support for an
immune-related genetic susceptibility to Parkinson's disease.
Human Molecular Genetics, December 2012.
[ DOI |
link |
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[6]
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Finja Büchel, Clemens Wrzodek, Florian Mittag, Andreas Dräger, Johannes
Eichner, Nicolas Rodriguez, Nicolas Le Novère, and Andreas Zell.
Qualitative translation of relations from BioPAX to SBML qual.
Bioinformatics, 28(20):2648--2653, August 2012.
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details |
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[7]
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Florian Mittag, Finja Büchel, Mohamad Saad, Andreas Jahn, Claudia Schulte,
Zoltan Bochdanovits, Javier Simón-Sánchez, Mike A Nalls, Margaux
Keller, Dena Hernandez, Raphael Gibbs, Suzanne Lesage, Alexis Brice, Peter
Heutink, Maria Martinez, Nicholas W Wood, John Hardy, Andrew B. Singleton,
Andreas Zell, Thomas Gasser, and Manu Sharma.
Use of Support Vector Machines for Disease Risk Prediction in
Genome-Wide Association Studies: Concerns and Opportunities.
Human Mutation, 33(12):1708--1718, June 2012.
[ DOI |
link ]
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[8]
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Margaux F. Keller, Mohamad Saad, Jose M. Bras, Francesco Bettella, Nayia
Nicolaou, Javier Simón-Sánchez, Florian Mittag, Finja Büchel, Manu
Sharma, J. Raphael Gibbs, Claudia Schulte, Valentina Moskvina, Alexandra
Durr, Peter Holmans, Laura L. Kilarski, Rita Guerreiro, Dena Hernandez,
Alexis Brice, Pauli Ylikotila, Hreinn Stefánsson, Kari Majamaa, Huw R.
Morris, Nigel Williams, Thomas Gasser, Peter Heutink, Nick Wood, John Hardy,
Maria Martinez, Andrew B. Singleton, and Michael A. Nalls.
Using genome-wide complex trait analysis 1 to quantify 'missing
heritability' in parkinson's disease.
Human Molecular Genetics, 21(22):4996--5009, 2012.
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[9]
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Clemens Wrzodek, Finja Büchel, Georg Hinselmann, Johannes Eichner, Florian
Mittag, and Andreas Zell.
Linking the epigenome to the genome: Correlation of different
features to DNA methylation of CpG islands.
PLoS ONE, 7(4):e35327, 04 2012.
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details |
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[10]
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Finja Büchel, Clemens Wrzodek, Florian Mittag, Andreas Dräger, Adrian
Schröder, and Andreas Zell.
ProDGe: investigating protein-protein interactions at the domain
level.
Technical report, Nature Precedings, August 2011.
[ DOI |
details |
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[11]
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Georg Buscher, Andreas Dengel, Ludger van Elst, and Florian Mittag.
Generating and using gaze-based document annotations.
In Proceedings and Extended Abstracts of the Conference on Human
Factors in Computing Systems, pages 3045--3050. ACM, 2008.
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[12]
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Thomas Roth-Berghofer and Florian Mittag.
ReduxExp: A justification-based explanation-support server.
In Miltos Petridis, Frans Coenen, and Max Bramer, editors,
Research and Development in Intelligent Systems XXV. Twenty-eighth SGAI
International Conference on Artificial Intelligence (AI-2008), November 9-11,
Cambridge, United Kingdom. Springer Verlag, London, UK, 2008.
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