Documentation Downloads Acknowledgments License

 


SBMLsimulator

An efficient Java™ solver implementation for SBML


Downloads

For terms of use please see the license of this software. You can download the program at the bottom of this page. We kindly ask you to register before downloading the software. A documentation of this software can be found in the documentation section



Registration (optional)

We would like to know who is using SBMLsimulator in order to inform users about new versions or new examples. You can download SBMLsimulator without registration as well. If you like to register, please fill in your details before proceeding to download the application. The personal data entered (e.g., name, affiliation, and e-mail) will only be used by us to keep track of downloads. Apart from the above, your personal data will not be used for any other purpose nor divulged to third parties.
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Download

SBMLsimulator only requires an installation of a Java™ Virtual Machine on your computer.


Documentation

For a detailed description of the program with all of its options, please see the documentation section.

File (Type) Size Version GPL version 3
SBMLsimulator (runnable jar) 14.3 MB 1.2.1 (2014-07-18)

Older releases
File (Type) Size Version
SBMLsimulator (runnable jar) 14.3 MB 1.2.0 (2014-04-24)
SBMLsimulator (runnable jar) 12.7 MB 1.1.0 (2012-04-25)
SBMLsimulator including dependencies (jar) 17 MB 1.0.0 (2012-03-01)

Systems Biology Simulation Core Library (computational core of the program)
See the download page of the library at sourceforge.net.
[1] Alexander Dörr, Roland Keller, Andreas Zell, and Andreas Dräger. SBMLsimulator: a Java tool for model simulation and parameter estimation in systems biology. Computation, 2(4):246--257, December 2014. [ DOI | details | link | link ]
[2] Roland Keller, Alexander Dörr, Akito Tabira, Akira Funahashi, Michael J. Ziller, Richard Adams, Nicolas Rodriguez, Nicolas Le Novère, Noriko Hiroi, Hannes Planatscher, Andreas Zell, and Andreas Dräger. The systems biology simulation core algorithm. BMC Systems Biology, 7:55, July 2013. [ DOI | details | link | pdf ]